BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007A09LP1|AL425624
(572 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig944 540 e-154
>3x_Contig944
Length = 2546
Score = 540 bits (255), Expect = e-154
Identities = 271/287 (94%)
Strand = Plus / Plus
Query: 3 ctgtggttttattggaagtggtggtaatttctcagtgatcttttcataatcccaaatacc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ctgtggttttattggaagtggtggtaatttctcagtgatcttttcataatcccaaatacc 414
Query: 63 tgttttgtcatttctagtatagattcggaactcactgcaccaatgacggtcaatataaac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tgttttgtcatttctagtatagattcggaactcactgcaccaatgacggtcaatataaac 474
Query: 123 actggttattctttgtgtttgaacatctgtcaagttatggaatttcacgattactctttt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 actggttattctttgtgtttgaacatctgtcaagttatggaatttcacgattactctttt 534
Query: 183 ttcgtcaggaattgttttcatgacttctataaagtcgtctagagttggtgtttmtttatt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 535 ttcgtcaggaattgttttcatgacttctataaagtcgtctagagttggtgtttctttatt 594
Query: 243 atmtamaaaatmaataammmatmmagttttmtmmtttgsakmmaaat 289
|| || ||||| ||||| || |||||| | |||| | ||||
Sbjct: 595 atctacaaaatcaataacccatccagttttctcctttggatccaaat 641
Score = 365 bits (172), Expect = e-101
Identities = 173/174 (99%)
Strand = Plus / Plus
Query: 399 ataacgtgaaggagtaataatatgcaggtcaccaacagtgcatctgaaggaaatatcttt 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 ataacgtgaaggagtaataatatgcaggtcaccaacagtgcatctgaaggaaatatcttt 807
Query: 459 ggaacccctttgaaccacaatgattatctcatctcctacactgctatctagaatgttatc 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ggaacccctttgaaccacaatgattatctcatctcctacactgctatctagaatgttatc 867
Query: 519 aacttgaataaatgaacatattggtgtgccattaatagaaatkaatgtgtcacc 572
|||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 868 aacttgaataaatgaacatattggtgtgccattaatagaaattaatgtgtcacc 921
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.47 0.725 1.38
Gapped
Lambda K H
1.47 0.725 1.38
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3058
Number of Sequences: 1807
Number of extensions: 3058
Number of successful extensions: 234
Number of sequences better than 1.0e-20: 1
length of query: 572
length of database: 10,358,551
effective HSP length: 15
effective length of query: 557
effective length of database: 10,331,446
effective search space: 5754615422
effective search space used: 5754615422
T: 0
A: 40
X1: 5 (10.6 bits)
X2: 14 (29.7 bits)
S1: 11 (23.8 bits)
S2: 47 (100.1 bits)